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  5. Solyc01g103860

Solyc01g103860


Description : COBRA-like protein (AHRD V3.3 *** L0AST8_POPTO)


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g103860
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
At1g09790 No alias COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500] 0.04 Orthogroups_2024-Update
At3g02210 No alias COBRA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7] 0.03 Orthogroups_2024-Update
At5g15630 No alias COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3] 0.03 Orthogroups_2024-Update
Glyma.04G160100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.19G033600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Potri.004G219200 No alias COBRA-like protein 6 precursor 0.03 Orthogroups_2024-Update
Potri.015G060100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Seita.7G184000.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Sopen01g046270 No alias COBRA-like protein 0.02 Orthogroups_2024-Update
Sopen02g015980 No alias COBRA-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 125 277
No external refs found!