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  5. Sopen00g007380

Sopen00g007380


Description : Lipoxygenase


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen00g007380
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
441081 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Brara.B01571.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
GRMZM2G009479 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
GRMZM5G822593 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Glyma.20G144600 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G076570.6 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
HORVU5Hr1G001180.3 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
HORVU6Hr1G000510.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
PSME_00002208-RA No alias (at1g55020 : 779.0) lipoxygenase, a defense gene... 0.03 Orthogroups_2024-Update
PSME_00017953-RA No alias (p37831|lox1_soltu : 1048.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
Seita.4G215400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
Seita.7G113700.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Sobic.001G125800.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.05 Orthogroups_2024-Update
Sobic.001G125900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sobic.001G483400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Sobic.003G385500.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.006G248300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Solyc09g075860 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013819 LipOase_C 182 832
IPR001024 PLAT/LH2_dom 64 168
No external refs found!