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  5. Solyc01g104000

Solyc01g104000


Description : Serine hydroxymethyltransferase (AHRD V3.3 *** K4B1X5_SOLLC)


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g104000
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
At1g22020 No alias Serine hydroxymethyltransferase 6... 0.03 Orthogroups_2024-Update
Bradi2g56557 No alias serine hydroxymethyltransferase 7 0.04 Orthogroups_2024-Update
Brara.H00601.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.03 Orthogroups_2024-Update
Potri.002G090200 No alias serine hydroxymethyltransferase 7 0.03 Orthogroups_2024-Update
Potri.005G170800 No alias serine hydroxymethyltransferase 7 0.03 Orthogroups_2024-Update
Sobic.003G373600.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.06 Orthogroups_2024-Update
Solyc02g091560 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** A0A0R4J3Y9_SOYBN) 0.03 Orthogroups_2024-Update
Sopen00g004190 No alias Serine hydroxymethyltransferase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001085 Ser_HO-MeTrfase 138 541
No external refs found!