Sopen00g008370

Description : Beta-lactamase superfamily domain

Gene families : OG_42_0003190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003190_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen00g008370
Cluster	HCCA clusters: Cluster_236

Target	Alias	Description	ECC score	Gene Family Method
At1g52160	No alias	tRNase Z TRZ3, mitochondrial...	0.03	Orthogroups_2024-Update
Bradi2g07852	No alias	tRNAse Z4	0.03	Orthogroups_2024-Update
Glyma.15G017900	No alias	tRNAse Z4	0.06	Orthogroups_2024-Update
PSME_00010427-RA	No alias	(at3g16260 : 349.0) Encodes a tRNase Z.; tRNAse Z4...	0.02	Orthogroups_2024-Update
Seita.5G007100.1	No alias	endoribonuclease *(RNase Z) & EC_3.1 hydrolase acting on...	0.07	Orthogroups_2024-Update
evm.model.tig00021133.10	No alias	(at3g16260 : 366.0) Encodes a tRNase Z.; tRNAse Z4...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR027794	tRNase_Z_dom	2	56

External Links

No external refs found!