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  5. Sopen00g012190

Sopen00g012190


Description : gag-polypeptide of LTR copia-type


Gene families : OG_42_0003353 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003353_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen00g012190
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G150850 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 85 196
IPR029472 Copia-like_N 22 69
No external refs found!