Sopen00g013160

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen00g013160
Cluster	HCCA clusters: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
Brara.D02818.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.E01887.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.G01010.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.G01084.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.I03278.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I03319.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Glyma.04G014300	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
MA_3307g0020	No alias	(at1g20880 : 189.0) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	18	76

External Links

No external refs found!