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  5. Sopen01g001320

Sopen01g001320


Description : Galactose oxidase, central domain


Gene families : OG_42_0002411 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g001320
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
174189 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
A4A49_16690 No alias adagio protein 3 0.11 Orthogroups_2024-Update
Brara.G00141.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.05 Orthogroups_2024-Update
Glyma.05G239400 No alias flavin-binding, kelch repeat, f box 1 0.05 Orthogroups_2024-Update
Glyma.15G162300 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G039300.2 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.06 Orthogroups_2024-Update
Potri.010G105700 No alias flavin-binding, kelch repeat, f box 1 0.03 Orthogroups_2024-Update
Solyc01g005300 No alias Flavin-binding kelch domain F box protein (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 226 264
IPR011498 Kelch_2 544 591
IPR000014 PAS 69 176
No external refs found!