1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g001390

Sopen01g001390


Description : EF hand


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g001390
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G106945 No alias EF hand calcium-binding protein family 0.02 Orthogroups_2024-Update
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.11G217200 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
PSME_00046736-RA No alias (at1g24620 : 146.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Potri.009G102500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Pp1s131_105V6 No alias calmodulin 0.02 Orthogroups_2024-Update
Seita.5G451500.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 77 139
IPR002048 EF_hand_dom 3 64
No external refs found!