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  5. Sopen01g001770

Sopen01g001770


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g001770
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.03 Orthogroups_2024-Update
At1g47890 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.A02063.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G00307.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G271200 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.04 Orthogroups_2024-Update
Glyma.14G046000 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os01g06670 No alias hcr2-5D, putative, expressed 0.03 Orthogroups_2024-Update
Potri.012G005700 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Potri.012G010601 No alias receptor like protein 43 0.02 Orthogroups_2024-Update
Potri.T164100 No alias receptor like protein 12 0.04 Orthogroups_2024-Update
Seita.2G105700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G199300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G059100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G033100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G075500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc01g014160 No alias No description available 0.03 Orthogroups_2024-Update
Solyc01g098370 No alias Leucine-rich receptor-like kinase family protein,... 0.02 Orthogroups_2024-Update
Solyc06g008300 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc08g077740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g009520 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g009740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g009780 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc12g099950 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen01g008060 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen03g006290 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen12g004520 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 134 155
IPR001611 Leu-rich_rpt 637 662
IPR001611 Leu-rich_rpt 105 121
IPR001611 Leu-rich_rpt 257 314
IPR001611 Leu-rich_rpt 567 623
IPR001611 Leu-rich_rpt 185 242
IPR001611 Leu-rich_rpt 422 481
IPR013210 LRR_N_plant-typ 20 77
No external refs found!