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  5. Sopen01g002540

Sopen01g002540


Description : Leucine rich repeat


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g002540
Cluster HCCA clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
Brara.D00691.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K01468.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G174128 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g07280 No alias disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426950g0010 No alias (at1g72180 : 128.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
Seita.6G199300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G059300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Solyc12g013680 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g099950 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 243 267
IPR001611 Leu-rich_rpt 173 228
IPR001611 Leu-rich_rpt 4 63
No external refs found!