Description : PPR repeat family
Gene families : OG_42_0009808 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009808_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen01g002840 | |
Cluster | HCCA clusters: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi4g07790 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.006G200800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Sobic.004G256900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g006850 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 461 | 487 |
IPR002885 | Pentatricopeptide_repeat | 1022 | 1051 |
IPR002885 | Pentatricopeptide_repeat | 251 | 280 |
IPR002885 | Pentatricopeptide_repeat | 917 | 946 |
IPR002885 | Pentatricopeptide_repeat | 882 | 906 |
IPR002885 | Pentatricopeptide_repeat | 391 | 419 |
IPR002885 | Pentatricopeptide_repeat | 426 | 454 |
IPR002885 | Pentatricopeptide_repeat | 282 | 331 |
IPR002885 | Pentatricopeptide_repeat | 492 | 537 |
IPR002885 | Pentatricopeptide_repeat | 948 | 995 |
IPR002885 | Pentatricopeptide_repeat | 774 | 821 |
No external refs found! |