Sopen01g003130

Description : Adaptin N terminal region

Gene families : OG_42_0003181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003181_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g003130
Cluster	HCCA clusters: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
At4g31480	No alias	Coatomer, beta subunit [Source:TAIR;Acc:AT4G31480]	0.02	Orthogroups_2024-Update
HORVU3Hr1G040350.1	No alias	subunit beta of cargo adaptor F-subcomplex	0.03	Orthogroups_2024-Update
MA_10431517g0010	No alias	(at4g31480 : 847.0) Coatomer, beta subunit; FUNCTIONS...	0.02	Orthogroups_2024-Update
Mp5g08450.1	No alias	subunit beta of cargo adaptor F-subcomplex	0.01	Orthogroups_2024-Update
PSME_00008063-RA	No alias	(at4g31480 : 1445.0) Coatomer, beta subunit; FUNCTIONS...	0.04	Orthogroups_2024-Update
Pp1s168_28V6	No alias	coatomer subunit beta	0.03	Orthogroups_2024-Update
Solyc10g081920	No alias	Coatomer subunit beta (AHRD V3.3 *** M1CQJ9_SOLTU)	0.02	Orthogroups_2024-Update
evm.model.tig00020553.156	No alias	(at4g31480 : 943.0) Coatomer, beta subunit; FUNCTIONS...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
CC	GO:0030117	membrane coat	IEA	InterProScan predictions
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044431	Golgi apparatus part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011710	Coatomer_bsu_C	670	808
IPR002553	Clathrin/coatomer_adapt-like_N	20	466
IPR029446	COPB1_appendage_platform_dom	814	941

External Links

No external refs found!

Sopen01g003130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation