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  5. Sopen01g003920

Sopen01g003920


Description : Leucine rich repeat


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g003920
Cluster HCCA clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G002818 No alias Leucine-rich repeat transmembrane protein kinase 0.02 Orthogroups_2024-Update
LOC_Os04g28210 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g40440 No alias expressed protein 0.02 Orthogroups_2024-Update
Sobic.008G076600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g005710 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Solyc01g006550 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc12g009740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen12g004520 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 8 28
IPR001611 Leu-rich_rpt 84 105
IPR001611 Leu-rich_rpt 266 324
IPR001611 Leu-rich_rpt 431 490
No external refs found!