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  5. Sopen01g004530

Sopen01g004530


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g004530
Cluster HCCA clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.11 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.06 Orthogroups_2024-Update
A4A49_04406 No alias putative cyclin-b3-1 0.02 Orthogroups_2024-Update
A4A49_05136 No alias g2mitotic-specific cyclin-1 0.03 Orthogroups_2024-Update
A4A49_05961 No alias g2mitotic-specific cyclin-1 0.03 Orthogroups_2024-Update
A4A49_12698 No alias cyclin-a1-3 0.06 Orthogroups_2024-Update
A4A49_20167 No alias cyclin-b2-4 0.04 Orthogroups_2024-Update
A4A49_35953 No alias g2mitotic-specific cyclin s13-6 0.13 Orthogroups_2024-Update
A4A49_40931 No alias g2mitotic-specific cyclin s13-6 0.09 Orthogroups_2024-Update
At1g20590 No alias Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91] 0.1 Orthogroups_2024-Update
At1g34460 No alias CYCLIN B1;5 [Source:TAIR;Acc:AT1G34460] 0.04 Orthogroups_2024-Update
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.1 Orthogroups_2024-Update
At1g47230 No alias Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2] 0.02 Orthogroups_2024-Update
At1g76310 No alias CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310] 0.09 Orthogroups_2024-Update
At2g17620 No alias Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068] 0.04 Orthogroups_2024-Update
At2g26760 No alias CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5] 0.08 Orthogroups_2024-Update
At3g11520 No alias Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] 0.05 Orthogroups_2024-Update
At4g35620 No alias Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] 0.11 Orthogroups_2024-Update
At4g37490 No alias Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183] 0.08 Orthogroups_2024-Update
Brara.A03403.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.2 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.18 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.21 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.11 Orthogroups_2024-Update
Brara.G03427.1 No alias regulatory protein *(CYCB) of cell cycle 0.07 Orthogroups_2024-Update
Brara.K00759.1 No alias regulatory protein *(CYCB) of cell cycle 0.11 Orthogroups_2024-Update
GRMZM2G061287 No alias CYCLIN B2;4 0.02 Orthogroups_2024-Update
Glyma.01G159700 No alias Cyclin B2;3 0.18 Orthogroups_2024-Update
Glyma.02G277600 No alias Cyclin family protein 0.24 Orthogroups_2024-Update
Glyma.03G123600 No alias Cyclin family protein 0.22 Orthogroups_2024-Update
Glyma.04G001100 No alias Cyclin B2;3 0.24 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.05 Orthogroups_2024-Update
Glyma.04G071600 No alias mitotic-like cyclin 3B from Arabidopsis 0.06 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.08 Orthogroups_2024-Update
Glyma.06G000600 No alias Cyclin B2;3 0.13 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.12 Orthogroups_2024-Update
Glyma.06G072900 No alias mitotic-like cyclin 3B from Arabidopsis 0.07 Orthogroups_2024-Update
Glyma.06G116100 No alias Cyclin A1;1 0.16 Orthogroups_2024-Update
Glyma.07G034100 No alias Cyclin A2;4 0.17 Orthogroups_2024-Update
Glyma.08G234900 No alias cyclin b3;1 0.16 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.08 Orthogroups_2024-Update
Glyma.13G031500 No alias Cyclin A1;1 0.1 Orthogroups_2024-Update
Glyma.14G037100 No alias Cyclin family protein 0.18 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.07 Orthogroups_2024-Update
Glyma.19G127200 No alias Cyclin family protein 0.25 Orthogroups_2024-Update
Kfl00112_0070 kfl00112_0070_v1.... (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.01 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.08 Orthogroups_2024-Update
LOC_Os03g41100 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.06 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.06 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.03 Orthogroups_2024-Update
Mp2g25500.1 No alias cyclin (CYCA) 0.04 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.06 Orthogroups_2024-Update
PSME_00031546-RA No alias (at1g44110 : 410.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.04 Orthogroups_2024-Update
Potri.001G272000 No alias Cyclin B1;4 0.06 Orthogroups_2024-Update
Potri.002G010000 No alias CYCLIN B2;4 0.06 Orthogroups_2024-Update
Potri.006G035200 No alias Cyclin family protein 0.06 Orthogroups_2024-Update
Potri.008G083200 No alias cyclin b3;1 0.03 Orthogroups_2024-Update
Potri.016G033000 No alias Cyclin family protein 0.05 Orthogroups_2024-Update
Pp1s271_10V6 No alias ccb15_orysj ame: full=cyclin-b1-5 ame: full=g2... 0.07 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.29 Orthogroups_2024-Update
Solyc02g082820 No alias cyclin B2 0.14 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.3 Orthogroups_2024-Update
Solyc03g120440 No alias cyclin A2_1 0.03 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.27 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.03 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.27 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.27 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.32 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.1 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.07 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.01 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 284 402
IPR006671 Cyclin_N 157 281
No external refs found!