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  5. Solyc01g105050

Solyc01g105050


Description : Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** M1AY18_SOLTU)


Gene families : OG_42_0005004 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g105050
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
271833 No alias light harvesting complex photosystem II subunit 6 0.04 Orthogroups_2024-Update
A4A49_19796 No alias chlorophyll a-b binding protein cp24 10a, chloroplastic 0.1 Orthogroups_2024-Update
At1g15820 No alias Chlorophyll a-b binding protein, chloroplastic... 0.07 Orthogroups_2024-Update
Bradi5g12150 No alias light harvesting complex photosystem II subunit 6 0.11 Orthogroups_2024-Update
Brara.F01095.1 No alias component *(LHCb6) of LHC-II complex 0.08 Orthogroups_2024-Update
Brara.H02525.1 No alias component *(LHCb6) of LHC-II complex 0.05 Orthogroups_2024-Update
Brara.I04910.1 No alias component *(LHCb6) of LHC-II complex 0.04 Orthogroups_2024-Update
GRMZM2G088983 No alias light harvesting complex photosystem II subunit 6 0.07 Orthogroups_2024-Update
GRMZM2G092427 No alias light harvesting complex photosystem II subunit 6 0.07 Orthogroups_2024-Update
Glyma.08G074000 No alias light harvesting complex photosystem II subunit 6 0.09 Orthogroups_2024-Update
Glyma.08G180000 No alias light harvesting complex photosystem II subunit 6 0.1 Orthogroups_2024-Update
Glyma.15G052400 No alias light harvesting complex photosystem II subunit 6 0.1 Orthogroups_2024-Update
HORVU2Hr1G079920.4 No alias component *(LHCb6) of LHC-II complex 0.05 Orthogroups_2024-Update
Kfl00276_0010 kfl00276_0010_v1.1 (at1g15820 : 338.0) Lhcb6 protein (Lhcb6), light... 0.03 Orthogroups_2024-Update
LOC_Os04g38410 No alias chlorophyll A-B binding protein, putative, expressed 0.07 Orthogroups_2024-Update
Mp6g01650.1 No alias component LHCb6 of LHC-II complex 0.03 Orthogroups_2024-Update
Potri.001G210000 No alias light harvesting complex photosystem II subunit 6 0.03 Orthogroups_2024-Update
Pp1s28_315V6 No alias chloroplast light-harvesting complex ii protein 0.12 Orthogroups_2024-Update
Pp1s28_319V6 No alias chloroplast light-harvesting complex ii protein 0.08 Orthogroups_2024-Update
Seita.7G121800.1 No alias component *(LHCb6) of LHC-II complex 0.1 Orthogroups_2024-Update
Sobic.006G264201.1 No alias component *(LHCb6) of LHC-II complex 0.09 Orthogroups_2024-Update
Sopen01g047560 No alias Chlorophyll A-B binding protein 0.15 Orthogroups_2024-Update
Sopen01g047580 No alias Chlorophyll A-B binding protein 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 68 244
No external refs found!