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  5. evm.model.contig_2012.3

evm.model.contig_2012.3


Description : (at4g22300 : 115.0) encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis; SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0003827 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2012.3
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Bradi5g25593 No alias carboxylesterases 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003140 PLipase/COase/thioEstase 21 237
No external refs found!