Description : (at5g44680 : 150.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description)
Gene families : OG_42_0000660 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000660_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_2029.5 | |
Cluster | HCCA clusters: Cluster_4 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006284 | base-excision repair | IEA | InterProScan predictions |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
CC | GO:0000930 | gamma-tubulin complex | IEP | Predicted GO |
CC | GO:0000931 | gamma-tubulin large complex | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Predicted GO |
MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEP | Predicted GO |
CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
CC | GO:0005777 | peroxisome | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
BP | GO:0007031 | peroxisome organization | IEP | Predicted GO |
CC | GO:0008274 | gamma-tubulin ring complex | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
BP | GO:0031503 | protein-containing complex localization | IEP | Predicted GO |
BP | GO:0033566 | gamma-tubulin complex localization | IEP | Predicted GO |
BP | GO:0034629 | cellular protein-containing complex localization | IEP | Predicted GO |
MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
CC | GO:0042579 | microbody | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
CC | GO:0044450 | microtubule organizing center part | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005019 | Adenine_glyco | 14 | 218 |
No external refs found! |