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  5. evm.model.contig_2044.12

evm.model.contig_2044.12


Description : (at1g08840 : 403.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 806.0) & (original description: no original description)


Gene families : OG_42_0006253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006253_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2044.12
Cluster HCCA clusters: Cluster_66


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008452 RNA ligase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014808 DNA_replication_fac_Dna2_N 263 476
No external refs found!