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  5. evm.model.contig_2051.21

evm.model.contig_2051.21


Description : (at1g55860 : 460.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 920.0) & (original description: no original description)


Gene families : OG_42_0001888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2051.21
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
At1g70320 No alias E3 ubiquitin-protein ligase UPL2... 0.01 Orthogroups_2024-Update
Bradi4g07997 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Cre01.g012450 No alias ubiquitin-protein ligase 1 0.02 Orthogroups_2024-Update
Cre10.g433900 No alias ubiquitin-protein ligase 1 0.01 Orthogroups_2024-Update
Glyma.02G216000 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Glyma.04G096900 No alias ubiquitin-protein ligase 1 0.01 Orthogroups_2024-Update
Glyma.05G133100 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Glyma.06G098700 No alias ubiquitin-protein ligase 1 0.01 Orthogroups_2024-Update
Glyma.08G087600 No alias ubiquitin-protein ligase 1 0.04 Orthogroups_2024-Update
Glyma.14G183000 No alias ubiquitin-protein ligase 2 0.02 Orthogroups_2024-Update
HORVU5Hr1G033930.8 No alias E3 ubiquitin ligase *(UPL1) 0.02 Orthogroups_2024-Update
LOC_Os09g07900 No alias ubiquitin-protein ligase 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g24080 No alias HECT-domain domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_20049g0010 No alias (at1g55860 : 1461.0) encodes a ubiquitin-protein ligase... 0.03 Orthogroups_2024-Update
MA_7295g0020 No alias (at1g70320 : 866.0) encodes a ubiquitin-protein... 0.02 Orthogroups_2024-Update
Mp4g21620.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Orthogroups_2024-Update
PSME_00024428-RA No alias (at1g55860 : 1240.0) encodes a ubiquitin-protein ligase... 0.03 Orthogroups_2024-Update
PSME_00025831-RA No alias (at1g55860 : 449.0) encodes a ubiquitin-protein ligase... 0.01 Orthogroups_2024-Update
Pp1s138_130V6 No alias e3 ubiquitin protein ligase 0.03 Orthogroups_2024-Update
Seita.2G152700.1 No alias E3 ubiquitin ligase *(UPL1) 0.03 Orthogroups_2024-Update
Seita.3G302600.1 No alias E3 ubiquitin ligase *(UPL1) 0.03 Orthogroups_2024-Update
Sobic.008G092600.1 No alias E3 ubiquitin ligase *(UPL1) 0.03 Orthogroups_2024-Update
Sopen04g030340 No alias HECT-domain (ubiquitin-transferase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025527 DUF4414 1107 1130
IPR025527 DUF4414 1179 1196
IPR025527 DUF4414 1247 1276
IPR000569 HECT_dom 2167 2474
No external refs found!