1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. evm.model.contig_2051.34

evm.model.contig_2051.34


Description : no hits & (original description: no original description)


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2051.34
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_21972 No alias gata transcription factor 4 0.02 Orthogroups_2024-Update
Brara.B01250.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.H01186.1 No alias transcription factor *(A/B-GATA) 0.01 Orthogroups_2024-Update
Cre08.g358532 No alias GATA transcription factor 9 0.02 Orthogroups_2024-Update
GRMZM2G031983 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
LOC_Os02g12790 No alias GATA zinc finger domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_44185g0010 No alias (at5g25830 : 135.0) Encodes a member of the GATA factor... 0.02 Orthogroups_2024-Update
Potri.018G053600 No alias GATA type zinc finger transcription factor family protein 0.01 Orthogroups_2024-Update
Pp1s167_128V6 No alias gata transcription factor 19 0.02 Orthogroups_2024-Update
Pp1s3_329V6 No alias gata transcription factor 19 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 33 66
No external refs found!