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evm.model.contig_2055.10


Description : (at5g63670 : 88.2) SPT4 homolog 2 (SPT42); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation Spt4-like (InterPro:IPR016046); BEST Arabidopsis thaliana protein match is: Transcription initiation Spt4-like protein (TAIR:AT5G08565.1). & (reliability: 176.4) & (original description: no original description)


Gene families : OG_42_0006006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2055.10
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Potri.010G255000 No alias SPT4 homolog 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022800 Spt4/RpoE2_Znf 20 96
No external refs found!