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  5. evm.model.contig_2068.16

evm.model.contig_2068.16


Description : (at4g19006 : 194.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)


Gene families : OG_42_0003327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2068.16
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Bradi5g20220 No alias Proteasome component (PCI) domain protein 0.03 Orthogroups_2024-Update
Brara.H00984.1 No alias regulatory component *(RPN9) of 26S proteasome 0.07 Orthogroups_2024-Update
Cre17.g734516 No alias Proteasome component (PCI) domain protein 0.05 Orthogroups_2024-Update
Glyma.09G210000 No alias Proteasome component (PCI) domain protein 0.02 Orthogroups_2024-Update
Kfl00818_0020 kfl00818_0020_v1.1 (at4g19006 : 515.0) Proteasome component (PCI) domain... 0.05 Orthogroups_2024-Update
LOC_Os01g32800 No alias proteasome subunit, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s131_74V6 No alias 26s proteasome non-atpase regulatory subunit 13 0.02 Orthogroups_2024-Update
Seita.9G306800.1 No alias regulatory component *(RPN9) of 26S proteasome 0.03 Orthogroups_2024-Update
Solyc05g053140 No alias 26S proteasome regulatory subunit family protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen05g031650 No alias PCI domain 0.05 Orthogroups_2024-Update
Sopen09g033660 No alias PCI domain 0.02 Orthogroups_2024-Update
evm.model.tig00000802.46 No alias no hits & (original description: no original description) 0.1 Orthogroups_2024-Update
evm.model.tig00000802.47 No alias (at4g19006 : 151.0) Proteasome component (PCI) domain... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000717 PCI_dom 237 342
No external refs found!