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  5. evm.model.contig_2075.4

evm.model.contig_2075.4


Description : (p23400|trxm_chlre : 102.0) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (at1g50320 : 92.8) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2075.4
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Bradi4g40800 No alias thioredoxin M-type 4 0.01 Orthogroups_2024-Update
Glyma.04G242000 No alias Thioredoxin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G151400 No alias thioredoxin M-type 4 0.02 Orthogroups_2024-Update
HORVU2Hr1G075240.5 No alias thioredoxin *(TRX-M) 0.02 Orthogroups_2024-Update
LOC_Os04g44830 No alias thioredoxin, putative, expressed 0.01 Orthogroups_2024-Update
MA_474303g0010 No alias (p07591|trxm_spiol : 182.0) Thioredoxin M-type,... 0.03 Orthogroups_2024-Update
Mp4g18950.1 No alias M-type thioredoxin 0.01 Orthogroups_2024-Update
Potri.001G401500 No alias thioredoxin M-type 4 0.01 Orthogroups_2024-Update
Pp1s23_109V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Pp1s317_45V6 No alias thioredoxin m - 0.01 Orthogroups_2024-Update
Seita.1G249300.1 No alias thioredoxin *(TRX-M) 0.02 Orthogroups_2024-Update
Seita.3G016700.1 No alias X-type thioredoxin *(Trx-X) 0.02 Orthogroups_2024-Update
Sobic.006G265900.1 No alias X-type thioredoxin *(Trx-X) 0.02 Orthogroups_2024-Update
Solyc12g013810 No alias Thioredoxin (AHRD V3.3 *** A0A103YK44_CYNCS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0032958 inositol phosphate biosynthetic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 6 105
No external refs found!