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Description : (original description: no original description)
Gene families : OG_42_0001888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001888_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_2081.3 | |
| Cluster | HCCA clusters: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 154179 | No alias | ubiquitin-protein ligase 1 | 0.02 | Orthogroups_2024-Update | |
| At1g70320 | No alias | E3 ubiquitin-protein ligase UPL2... | 0.02 | Orthogroups_2024-Update | |
| Bradi4g07997 | No alias | ubiquitin-protein ligase 1 | 0.02 | Orthogroups_2024-Update | |
| Cre01.g012450 | No alias | ubiquitin-protein ligase 1 | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G216000 | No alias | ubiquitin-protein ligase 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G096900 | No alias | ubiquitin-protein ligase 1 | 0.02 | Orthogroups_2024-Update | |
| Glyma.05G133100 | No alias | ubiquitin-protein ligase 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G098700 | No alias | ubiquitin-protein ligase 1 | 0.01 | Orthogroups_2024-Update | |
| Glyma.08G087600 | No alias | ubiquitin-protein ligase 1 | 0.05 | Orthogroups_2024-Update | |
| Glyma.14G183000 | No alias | ubiquitin-protein ligase 2 | 0.01 | Orthogroups_2024-Update | |
| HORVU5Hr1G033930.8 | No alias | E3 ubiquitin ligase *(UPL1) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g07900 | No alias | ubiquitin-protein ligase 1, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g24080 | No alias | HECT-domain domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| MA_20049g0010 | No alias | (at1g55860 : 1461.0) encodes a ubiquitin-protein ligase... | 0.01 | Orthogroups_2024-Update | |
| MA_7295g0020 | No alias | (at1g70320 : 866.0) encodes a ubiquitin-protein... | 0.01 | Orthogroups_2024-Update | |
| Mp4g21620.1 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.01 | Orthogroups_2024-Update | |
| PSME_00024428-RA | No alias | (at1g55860 : 1240.0) encodes a ubiquitin-protein ligase... | 0.02 | Orthogroups_2024-Update | |
| Pp1s138_130V6 | No alias | e3 ubiquitin protein ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.2G152700.1 | No alias | E3 ubiquitin ligase *(UPL1) | 0.04 | Orthogroups_2024-Update | |
| Sopen04g030340 | No alias | HECT-domain (ubiquitin-transferase) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| CC | GO:0017119 | Golgi transport complex | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| CC | GO:0030915 | Smc5-Smc6 complex | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| CC | GO:0106068 | SUMO ligase complex | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010314 | E3_Ub_ligase_DUF913 | 822 | 1020 |
| No external refs found! |