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  5. evm.model.contig_2102.17

evm.model.contig_2102.17


Description : no hits & (original description: no original description)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2102.17
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
A4A49_29196 No alias ring-h2 finger protein atl72 0.01 Orthogroups_2024-Update
A4A49_40392 No alias ring-h2 finger protein atl58 0.03 Orthogroups_2024-Update
At1g53820 No alias RING-H2 finger protein ATL60... 0.02 Orthogroups_2024-Update
At1g72220 No alias RING-H2 finger protein ATL54... 0.02 Orthogroups_2024-Update
At2g35000 No alias E3 ubiquitin-protein ligase ATL9... 0.02 Orthogroups_2024-Update
At3g18930 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
At4g10150 No alias RING-H2 finger protein ATL7... 0.02 Orthogroups_2024-Update
At5g05280 No alias RING-H2 finger protein ATL73... 0.01 Orthogroups_2024-Update
At5g07040 No alias Putative RING-H2 finger protein ATL69... 0.02 Orthogroups_2024-Update
Bradi1g45727 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g56160 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g02830 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g44454 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
Brara.A02911.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.A03822.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00933.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E02489.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F00385.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Brara.F02863.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H00897.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I04244.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.J02673.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.K00650.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G150832 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G480106 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.02G210400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.09G140700 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G042300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G292600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G058000 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G050900 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.19G010400 No alias hypoxia-responsive family protein / zinc finger... 0.02 Orthogroups_2024-Update
HORVU1Hr1G001970.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G069960.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G081150.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G022830.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
HORVU5Hr1G007760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G004090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G050490.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU7Hr1G120910.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G120930.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os01g53500 No alias RING-H2 finger protein ATL2M, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os02g14990 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os02g15100 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g39940 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os09g29310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os11g02260 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os12g24530 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
MA_19072g0010 No alias (at5g17600 : 137.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
MA_31462g0010 No alias (at1g49220 : 101.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
MA_37930g0010 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.03 Orthogroups_2024-Update
PSME_00003022-RA No alias (at1g72200 : 164.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
PSME_00042839-RA No alias (at4g35480 : 80.9) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
PSME_00054668-RA No alias (at5g01880 : 101.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.001G162000 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.003G073300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G192700 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.005G071300 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.008G054200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G063100 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G010500 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.019G130100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.T081800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Pp1s85_173V6 No alias No description available 0.01 Orthogroups_2024-Update
Seita.1G017500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.001G378600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Sobic.003G299800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G005000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G109100.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G175600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G110200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.02 Orthogroups_2024-Update
Solyc03g032060 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.02 Orthogroups_2024-Update
Sopen01g051390 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen06g021450 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g021460 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g021470 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen07g002500 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.tig00020684.6 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 503 545
No external refs found!