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  5. Sopen01g006090

Sopen01g006090


Description : PAS domain


Gene families : OG_42_0004388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g006090
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
At2g02710 No alias Protein TWIN LOV 1 [Source:UniProtKB/Swiss-Prot;Acc:O64511] 0.03 Orthogroups_2024-Update
Bradi2g05520 No alias PAS/LOV protein B 0.04 Orthogroups_2024-Update
PSME_00005217-RA No alias (at2g02710 : 315.0) Encodes a putative blue light... 0.03 Orthogroups_2024-Update
Seita.5G132900.1 No alias UV-A/blue light photoreceptor *(PLP) 0.03 Orthogroups_2024-Update
Sobic.003G037300.1 No alias UV-A/blue light photoreceptor *(PLP) 0.03 Orthogroups_2024-Update
Solyc01g010480 No alias LOV/LOV protein (AHRD V3.3 *** E3WH16_SOLLC) 0.05 Orthogroups_2024-Update
Solyc05g007020 No alias LOV/LOV protein (AHRD V3.3 *** E3WH16_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000014 PAS 252 340
IPR000014 PAS 22 123
No external refs found!