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  5. evm.model.contig_2112.2

evm.model.contig_2112.2


Description : (at5g06530 : 343.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (q8gu92|pdr2_orysa : 259.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 686.0) & (original description: no original description)


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2112.2
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Brara.B00211.1 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Cre03.g169300 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Cre17.g743547 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Kfl00050_0290 kfl00050_0290_v1.1 (at5g06530 : 526.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update
LOC_Os08g07010 No alias ABC-2 type transporter domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00019170-RA No alias (at5g06530 : 722.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update
Pp1s65_100V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
evm.model.tig00020685.31 No alias (at5g06530 : 184.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 415 629
IPR003439 ABC_transporter-like 115 270
No external refs found!