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  5. evm.model.contig_2130.2

evm.model.contig_2130.2


Description : (at1g74270 : 120.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2130.2
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
At1g07070 No alias 60S ribosomal protein L35a-1... 0.08 Orthogroups_2024-Update
At1g41880 No alias 60S ribosomal protein L35a-2... 0.03 Orthogroups_2024-Update
At1g74270 No alias 60S ribosomal protein L35a-3... 0.02 Orthogroups_2024-Update
Bradi1g46840 No alias Ribosomal protein L35Ae family protein 0.12 Orthogroups_2024-Update
Bradi2g17180 No alias Ribosomal protein L35Ae family protein 0.04 Orthogroups_2024-Update
Bradi3g60180 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
Bradi4g16690 No alias Ribosomal protein L35Ae family protein 0.08 Orthogroups_2024-Update
Brara.B02119.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.37 Orthogroups_2024-Update
Brara.D00376.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.34 Orthogroups_2024-Update
Brara.G02281.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.G03191.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.42 Orthogroups_2024-Update
Brara.I03824.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.29 Orthogroups_2024-Update
Cre10.g459250 No alias Ribosomal protein L35Ae family protein 0.42 Orthogroups_2024-Update
GRMZM2G181336 No alias Ribosomal protein L35Ae family protein 0.13 Orthogroups_2024-Update
GRMZM5G890561 No alias Ribosomal protein L35Ae family protein 0.19 Orthogroups_2024-Update
Glyma.02G253500 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
Glyma.05G132500 No alias Ribosomal protein L35Ae family protein 0.29 Orthogroups_2024-Update
Glyma.08G087000 No alias Ribosomal protein L35Ae family protein 0.34 Orthogroups_2024-Update
Glyma.14G062900 No alias Ribosomal protein L35Ae family protein 0.25 Orthogroups_2024-Update
HORVU6Hr1G083120.2 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
HORVU7Hr1G031850.4 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Kfl00148_0220 kfl00148_0220_v1.1 (at3g55750 : 81.6) Ribosomal protein L35Ae family... 0.17 Orthogroups_2024-Update
LOC_Os02g54470 No alias 60S ribosomal protein L35a-3, putative, expressed 0.07 Orthogroups_2024-Update
MA_79041g0010 No alias (at1g74270 : 149.0) Ribosomal protein L35Ae family... 0.08 Orthogroups_2024-Update
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.26 Orthogroups_2024-Update
PSME_00007301-RA No alias (at1g74270 : 157.0) Ribosomal protein L35Ae family... 0.16 Orthogroups_2024-Update
PSME_00044476-RA No alias (at1g74270 : 189.0) Ribosomal protein L35Ae family... 0.03 Orthogroups_2024-Update
Potri.008G059400 No alias Ribosomal protein L35Ae family protein 0.11 Orthogroups_2024-Update
Potri.010G194200 No alias Ribosomal protein L35Ae family protein 0.15 Orthogroups_2024-Update
Potri.010G199400 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
Pp1s102_133V6 No alias 60s ribosomal protein 0.08 Orthogroups_2024-Update
Pp1s1_549V6 No alias 60s ribosomal protein 0.39 Orthogroups_2024-Update
Pp1s2_655V6 No alias 60s ribosomal protein 0.48 Orthogroups_2024-Update
Pp1s52_116V6 No alias 60s ribosomal protein 0.45 Orthogroups_2024-Update
Pp1s61_123V6 No alias 60s ribosomal protein 0.18 Orthogroups_2024-Update
Seita.1G344200.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.4G043000.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.002G179300.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.35 Orthogroups_2024-Update
Sobic.004G322200.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.010G070500.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.36 Orthogroups_2024-Update
Solyc03g096360 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.34 Orthogroups_2024-Update
Solyc05g052800 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.08 Orthogroups_2024-Update
Solyc05g052810 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.26 Orthogroups_2024-Update
Sopen03g026480 No alias Ribosomal protein L35Ae 0.51 Orthogroups_2024-Update
Sopen05g031310 No alias Ribosomal protein L35Ae 0.04 Orthogroups_2024-Update
Sopen05g031320 No alias Ribosomal protein L35Ae 0.15 Orthogroups_2024-Update
evm.model.tig00020723.23 No alias (at3g55750 : 148.0) Ribosomal protein L35Ae family... 0.3 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 8 107
No external refs found!