evm.model.contig_2131.1

Description : (at3g20970 : 179.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 4 (NFU4); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 5 (TAIR:AT1G51390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description)

Gene families : OG_42_0004973 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004973_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Porphyridium release: evm.model.contig_2131.1
Cluster	HCCA clusters: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method	Actions
At1g51390	No alias	NifU-like protein 5, mitochondrial...	0.01	Orthogroups_2024-Update
Pp1s322_22V6	No alias	No description available	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	InterProScan predictions
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	InterProScan predictions
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0051186	cofactor metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	InterProScan predictions
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004594	pantothenate kinase activity	IEP	Predicted GO
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
CC	GO:0005672	transcription factor TFIIA complex	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
BP	GO:0006658	phosphatidylserine metabolic process	IEP	Predicted GO
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	Predicted GO
MF	GO:0008452	RNA ligase activity	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
CC	GO:0031965	nuclear membrane	IEP	Predicted GO
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
BP	GO:0055088	lipid homeostasis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001075	NIF_FeS_clus_asmbl_NifU_C	188	256
IPR014824	Nfu/NifU_N	71	157

External Links

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evm.model.contig_2131.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation