1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. evm.model.contig_2143.3

evm.model.contig_2143.3


Description : no hits & (original description: no original description)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2143.3
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
At3g01770 No alias Transcription factor GTE11... 0.01 Orthogroups_2024-Update
Bradi2g34827 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
GRMZM2G167718 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.12G209100 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.15G060300 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.16G062200 No alias global transcription factor group E8 0.02 Orthogroups_2024-Update
LOC_Os07g32420 No alias bromodomain domain containing protein, expressed 0.01 Orthogroups_2024-Update
PSME_00030746-RA No alias (at3g52280 : 179.0) Bromodomain containing... 0.02 Orthogroups_2024-Update
Potri.010G219200 No alias Transcription factor GTE6 0.02 Orthogroups_2024-Update
Potri.019G090700 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Pp1s353_39V6 No alias global transcription factor group 0.02 Orthogroups_2024-Update
Seita.5G149400.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.004G205600.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Sopen03g030240 No alias Bromodomain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000726 non-recombinational repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 312 375
IPR001487 Bromodomain 98 190
No external refs found!