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  5. evm.model.contig_2162.2

evm.model.contig_2162.2


Description : no hits & (original description: no original description)


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2162.2
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
A4A49_03229 No alias pentatricopeptide repeat-containing protein, chloroplastic 0.01 Orthogroups_2024-Update
Brara.I01310.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G175200 No alias ATP binding;nucleic acid binding;helicases 0.02 Orthogroups_2024-Update
Glyma.09G176800 No alias ATP binding;nucleic acid binding;helicases 0.03 Orthogroups_2024-Update
Potri.005G047400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 196
IPR002885 Pentatricopeptide_repeat 88 136
No external refs found!