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  5. evm.model.contig_2172.10

evm.model.contig_2172.10


Description : (at1g02475 : 81.6) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01883.1); Has 515 Blast hits to 515 proteins in 169 species: Archae - 0; Bacteria - 342; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)


Gene families : OG_42_0003805 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2172.10
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12300 No alias Polyketide cyclase/dehydrase and lipid transport... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR005031 COQ10_START 50 174
No external refs found!