Description : (p31022|rab7_pea : 255.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (at3g18820 : 254.0) RAB GTPase homolog G3F (RAB7B); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2); Has 26432 Blast hits to 26399 proteins in 759 species: Archae - 38; Bacteria - 171; Metazoa - 13566; Fungi - 4011; Plants - 2887; Viruses - 20; Other Eukaryotes - 5739 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description)
Gene families : OG_42_0001031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_2286.22 | |
Cluster | HCCA clusters: Cluster_3 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g18540 | No alias | RAB GTPase homolog G3A | 0.02 | Orthogroups_2024-Update | |
Brara.D01292.1 | No alias | G-class RAB GTPase | 0.02 | Orthogroups_2024-Update | |
Sobic.003G276100.1 | No alias | G-class RAB GTPase | 0.02 | Orthogroups_2024-Update | |
Solyc03g120750 | No alias | Rab family GTPase (AHRD V3.3 *** D8RRT7_SELML) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
MF | GO:0005525 | GTP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Predicted GO |
MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Predicted GO |
MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
BP | GO:0006007 | glucose catabolic process | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006551 | leucine metabolic process | IEP | Predicted GO |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009098 | leucine biosynthetic process | IEP | Predicted GO |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
BP | GO:0019320 | hexose catabolic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
BP | GO:0046365 | monosaccharide catabolic process | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 12 | 176 |
No external refs found! |