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  5. evm.model.contig_2286.28

evm.model.contig_2286.28


Description : no hits & (original description: no original description)


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2286.28
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Brara.C01000.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
GRMZM2G054193 No alias vesicle-associated membrane protein 726 0.01 Orthogroups_2024-Update
Sopen06g024430 No alias Synaptobrevin 0.01 Orthogroups_2024-Update
evm.model.tig00000880.46 No alias (at5g22360 : 152.0) Member of Synaptobrevin-like... 0.01 Orthogroups_2024-Update
evm.model.tig00000880.51 No alias (at5g22360 : 145.0) Member of Synaptobrevin-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031965 nuclear membrane IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0055088 lipid homeostasis IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901031 regulation of response to reactive oxygen species IEP Predicted GO
BP GO:1902882 regulation of response to oxidative stress IEP Predicted GO
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 133 217
IPR010908 Longin_dom 48 102
No external refs found!