1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. evm.model.contig_2304.2

evm.model.contig_2304.2


Description : no hits & (original description: no original description)


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2304.2
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At4g32150 No alias Vesicle-associated membrane protein 711... 0.01 Orthogroups_2024-Update
Cre04.g224800 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
HORVU7Hr1G059240.4 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
PSME_00030647-RA No alias (at5g22360 : 166.0) Member of Synaptobrevin-like... 0.01 Orthogroups_2024-Update
PSME_00046258-RA No alias (at3g54300 : 330.0) Encodes a member of Synaptobrevin... 0.02 Orthogroups_2024-Update
Potri.002G240900 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
Sopen12g033000 No alias Synaptobrevin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 153 238
No external refs found!