1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. evm.model.contig_2497.2

evm.model.contig_2497.2


Description : (p10978|polx_tobac : 110.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 94.4) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2497.2
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_2212.2 No alias (original description: no original description) 0.06 Orthogroups_2024-Update
evm.model.contig_2214.1 No alias (p10978|polx_tobac : 144.0) Retrovirus-related Pol... 0.12 Orthogroups_2024-Update
evm.model.contig_3460.4 No alias no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
evm.model.contig_4508.4 No alias (p10978|polx_tobac : 387.0) Retrovirus-related Pol... 0.17 Orthogroups_2024-Update
evm.model.contig_459.3 No alias no hits & (original description: no original description) 0.25 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 737 976
No external refs found!