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evm.model.contig_2656.1


Description : (gnl|cdd|68872 : 105.0) no description available & (p16016|cahc_spiol : 84.7) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Spinacia oleracea (Spinach) & (at5g14740 : 81.3) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)


Gene families : OG_42_0000693 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2656.1
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
102513 No alias carbonic anhydrase 2 0.02 Orthogroups_2024-Update
86779 No alias carbonic anhydrase 2 0.02 Orthogroups_2024-Update
At3g01500 No alias Beta carbonic anhydrase 1, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi2g44856 No alias carbonic anhydrase 2 0.02 Orthogroups_2024-Update
Glyma.01G030500 No alias carbonic anhydrase 2 0.02 Orthogroups_2024-Update
Glyma.02G035000 No alias carbonic anhydrase 2 0.02 Orthogroups_2024-Update
Glyma.05G007100 No alias carbonic anhydrase 1 0.02 Orthogroups_2024-Update
Glyma.19G007700 No alias carbonic anhydrase 1 0.04 Orthogroups_2024-Update
Kfl00276_0020 kfl00276_0020_v1.1 (at5g14740 : 152.0) Encodes a beta carbonic anhydrase... 0.02 Orthogroups_2024-Update
MA_25325g0010 No alias (p27141|cahc_tobac : 288.0) Carbonic anhydrase,... 0.02 Orthogroups_2024-Update
MA_258624g0010 No alias (p27141|cahc_tobac : 257.0) Carbonic anhydrase,... 0.01 Orthogroups_2024-Update
Potri.001G348900 No alias carbonic anhydrase 1 0.01 Orthogroups_2024-Update
Pp1s43_118V6 No alias carbonic chloroplast precursor 0.03 Orthogroups_2024-Update
Solyc02g086820 No alias chloroplast carbonic anhydrase 0.03 Orthogroups_2024-Update
Solyc05g005490 No alias carbonic anhydrase 0.04 Orthogroups_2024-Update
Sopen02g031590 No alias Carbonic anhydrase 0.02 Orthogroups_2024-Update
evm.model.tig00000545.32 No alias (at5g14740 : 93.2) Encodes a beta carbonic anhydrase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0032958 inositol phosphate biosynthetic process IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 149 301
IPR001765 Carbonic_anhydrase 403 555
No external refs found!