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  5. Sopen01g008050

Sopen01g008050


Description : Photosynthetic reaction centre protein


Gene families : OG_42_0001749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001749_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen01g008050
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
236852 No alias photosystem II reaction center protein A 0.02 Orthogroups_2024-Update
Bradi4g19720 No alias photosystem II reaction center protein A 0.02 Orthogroups_2024-Update
Bradi5g10967 No alias photosystem II reaction center protein A 0.02 Orthogroups_2024-Update
Brara.B03183.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G017870.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU2Hr1G062060.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G121820.5 No alias component *(PsbA/D1) of PS-II reaction center complex 0.05 Orthogroups_2024-Update
HORVU3Hr1G004790.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.03 Orthogroups_2024-Update
PSME_00003759-RA No alias (p69551|psba_pinth : 308.0) Photosystem Q(B) protein (32... 0.02 Orthogroups_2024-Update
PSME_00021857-RA No alias (p69551|psba_pinth : 509.0) Photosystem Q(B) protein (32... 0.02 Orthogroups_2024-Update
Seita.J017900.1 No alias component *(PsbA/D1) of PS-II reaction center complex 0.05 Orthogroups_2024-Update
Solyc01g097530 No alias LOW QUALITY:Photosystem II 32 kDa protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g011990 No alias Photosystem II protein D1 (AHRD V3.3 *** F1KC16_9ASTE) 0.11 Orthogroups_2024-Update
Solyc05g016120 No alias Photosystem II protein D1 (AHRD V3.3 *-* PSBA_BARVE) 0.14 Orthogroups_2024-Update
Solyc11g056340 No alias LOW QUALITY:Photosystem II protein D1 (AHRD V3.3 *-* PSBA_SOLNI) 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA InterProScan predictions
BP GO:0019684 photosynthesis, light reaction IEA InterProScan predictions
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 28 327
No external refs found!