evm.model.contig_3384.21

Description : (p46295|rs14_chlre : 213.0) 40S ribosomal protein S14 - Chlamydomonas reinhardtii & (at3g52580 : 210.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description)

Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Porphyridium release: evm.model.contig_3384.21
Cluster	HCCA clusters: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
183051	No alias	Ribosomal protein S11 family protein	0.24	Orthogroups_2024-Update
At3g52580	No alias	40S ribosomal protein S14-3...	0.07	Orthogroups_2024-Update
Bradi1g32830	No alias	Ribosomal protein S11 family protein	0.34	Orthogroups_2024-Update
Bradi3g04790	No alias	Ribosomal protein S11 family protein	0.27	Orthogroups_2024-Update
Bradi5g09460	No alias	Ribosomal protein S11 family protein	0.01	Orthogroups_2024-Update
Brara.A03404.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.3	Orthogroups_2024-Update
Brara.C01814.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Brara.C03369.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.3	Orthogroups_2024-Update
Brara.D02197.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Brara.E00860.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
Brara.E02925.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.27	Orthogroups_2024-Update
Brara.I03565.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.J02603.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.26	Orthogroups_2024-Update
Cre11.g480150	No alias	Ribosomal protein S11 family protein	0.33	Orthogroups_2024-Update
GRMZM2G069762	No alias	Ribosomal protein S11 family protein	0.24	Orthogroups_2024-Update
GRMZM2G100462	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
GRMZM2G120432	No alias	Ribosomal protein S11 family protein	0.11	Orthogroups_2024-Update
Glyma.03G241100	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Glyma.03G241300	No alias	Ribosomal protein S11 family protein	0.16	Orthogroups_2024-Update
Glyma.13G217200	No alias	Ribosomal protein S11 family protein	0.13	Orthogroups_2024-Update
Glyma.15G095300	No alias	Ribosomal protein S11 family protein	0.21	Orthogroups_2024-Update
Glyma.19G238600	No alias	Ribosomal protein S11 family protein	0.21	Orthogroups_2024-Update
Glyma.19G238800	No alias	Ribosomal protein S11 family protein	0.13	Orthogroups_2024-Update
HORVU0Hr1G004130.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
HORVU7Hr1G104220.3	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Kfl00094_0120	kfl00094_0120_v1.1	(p19951\|rs142_maize : 200.0) 40S ribosomal protein S14...	0.04	Orthogroups_2024-Update
LOC_Os02g06700	No alias	ribosomal protein, putative, expressed	0.07	Orthogroups_2024-Update
MA_113075g0010	No alias	(p19951\|rs142_maize : 223.0) 40S ribosomal protein S14...	0.07	Orthogroups_2024-Update
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.17	Orthogroups_2024-Update
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.14	Orthogroups_2024-Update
PSME_00002720-RA	No alias	(p19951\|rs142_maize : 226.0) 40S ribosomal protein S14...	0.1	Orthogroups_2024-Update
Potri.001G218700	No alias	Ribosomal protein S11 family protein	0.12	Orthogroups_2024-Update
Potri.004G131800	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Potri.011G080500	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
Pp1s271_98V6	No alias	40s ribosomal protein	0.44	Orthogroups_2024-Update
Pp1s316_6V6	No alias	40s ribosomal protein	0.42	Orthogroups_2024-Update
Seita.1G078300.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Seita.1G181800.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Seita.4G260200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.37	Orthogroups_2024-Update
Seita.7G091900.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.16	Orthogroups_2024-Update
Sobic.006G106100.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.32	Orthogroups_2024-Update
Sobic.010G205400.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.28	Orthogroups_2024-Update
Sobic.010G206200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.23	Orthogroups_2024-Update
Solyc02g070570	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR)	0.3	Orthogroups_2024-Update
Solyc09g010100	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR)	0.49	Orthogroups_2024-Update
Solyc10g083280	No alias	40S ribosomal protein S14-2	0.5	Orthogroups_2024-Update
Sopen02g019660	No alias	Ribosomal protein S11	0.44	Orthogroups_2024-Update
Sopen09g004840	No alias	Ribosomal protein S11	0.3	Orthogroups_2024-Update
Sopen10g032760	No alias	Ribosomal protein S11	0.48	Orthogroups_2024-Update
evm.model.tig00001154.44	No alias	(p19950\|rs141_maize : 166.0) 40S ribosomal protein S14...	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006448	regulation of translational elongation	IEP	Predicted GO
BP	GO:0006449	regulation of translational termination	IEP	Predicted GO
BP	GO:0006452	translational frameshifting	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0031369	translation initiation factor binding	IEP	Predicted GO
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0045727	positive regulation of translation	IEP	Predicted GO
BP	GO:0045901	positive regulation of translational elongation	IEP	Predicted GO
BP	GO:0045905	positive regulation of translational termination	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	31	149

External Links

No external refs found!

evm.model.contig_3384.21

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation