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Description : (at5g26040 : 80.5) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)
Gene families : OG_42_0011498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_3410.13 | |
| Cluster | HCCA clusters: Cluster_33 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Predicted GO |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
| MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0048038 | quinone binding | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 128 | 375 |
| No external refs found! |