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  5. evm.model.contig_3443.7

evm.model.contig_3443.7


Description : (at5g59290 : 451.0) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-glucuronic acid decarboxylase 3 (UXS3); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 42743 Blast hits to 42677 proteins in 3006 species: Archae - 845; Bacteria - 24952; Metazoa - 655; Fungi - 341; Plants - 1394; Viruses - 85; Other Eukaryotes - 14471 (source: NCBI BLink). & (q2r1v8|gme2_orysa : 96.3) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 902.0) & (original description: no original description)


Gene families : OG_42_0000621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3443.7
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66440 No alias UDP-XYL synthase 6 0.02 Orthogroups_2024-Update
Bradi2g11960 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Brara.D00052.1 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.01 Orthogroups_2024-Update
HORVU4Hr1G059130.6 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Seita.2G429400.1 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Seita.9G451200.1 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Sobic.001G418100.1 No alias UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 105 402
No external refs found!