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  5. evm.model.contig_3468.4

evm.model.contig_3468.4


Description : (at4g18100 : 165.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description)


Gene families : OG_42_0001481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3468.4
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
146656 No alias Ribosomal protein L32e 0.18 Orthogroups_2024-Update
A4A49_20600 No alias 60s ribosomal protein l32-1 0.21 Orthogroups_2024-Update
A4A49_36410 No alias 60s ribosomal protein l32-1 0.24 Orthogroups_2024-Update
A4A49_65839 No alias 60s ribosomal protein l32-1 0.13 Orthogroups_2024-Update
AC197246.3_FG003 No alias Ribosomal protein L32e 0.11 Orthogroups_2024-Update
Bradi3g40840 No alias Ribosomal protein L32e 0.18 Orthogroups_2024-Update
Bradi3g40870 No alias Ribosomal protein L32e 0.19 Orthogroups_2024-Update
Bradi4g34340 No alias Ribosomal protein L32e 0.06 Orthogroups_2024-Update
Bradi4g34360 No alias Ribosomal protein L32e 0.09 Orthogroups_2024-Update
Brara.A00927.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Brara.F03620.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.H00903.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Brara.I01935.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.K00462.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.31 Orthogroups_2024-Update
Cre06.g289550 No alias Ribosomal protein L32e 0.15 Orthogroups_2024-Update
GRMZM2G047971 No alias Ribosomal protein L32e 0.12 Orthogroups_2024-Update
GRMZM2G065868 No alias Ribosomal protein L32e 0.13 Orthogroups_2024-Update
Glyma.05G156100 No alias Ribosomal protein L32e 0.01 Orthogroups_2024-Update
Glyma.08G114000 No alias Ribosomal protein L32e 0.07 Orthogroups_2024-Update
Glyma.08G114100 No alias Ribosomal protein L32e 0.14 Orthogroups_2024-Update
Glyma.11G226800 No alias Ribosomal protein L32e 0.09 Orthogroups_2024-Update
Glyma.13G051200 No alias Ribosomal protein L32e 0.16 Orthogroups_2024-Update
Glyma.15G195500 No alias Ribosomal protein L32e 0.1 Orthogroups_2024-Update
HORVU5Hr1G075420.2 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
HORVU5Hr1G075500.3 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
HORVU7Hr1G052960.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Kfl00109_0130 kfl00109_0130_v1.1 (at4g18100 : 201.0) Ribosomal protein L32e; FUNCTIONS... 0.15 Orthogroups_2024-Update
LOC_Os08g41300 No alias 60S ribosomal protein L32, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434621g0010 No alias (at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS... 0.08 Orthogroups_2024-Update
MA_41569g0010 No alias (at4g18100 : 200.0) Ribosomal protein L32e; FUNCTIONS... 0.07 Orthogroups_2024-Update
Mp7g12480.1 No alias component RPL32 of LSU proteome component 0.15 Orthogroups_2024-Update
PSME_00016744-RA No alias (at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS... 0.17 Orthogroups_2024-Update
PSME_00022452-RA No alias (at4g18100 : 139.0) Ribosomal protein L32e; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00048254-RA No alias (at4g18100 : 203.0) Ribosomal protein L32e; FUNCTIONS... 0.06 Orthogroups_2024-Update
Potri.001G353900 No alias Ribosomal protein L32e 0.05 Orthogroups_2024-Update
Potri.002G249000 No alias Ribosomal protein L32e 0.11 Orthogroups_2024-Update
Potri.014G191000 No alias Ribosomal protein L32e 0.06 Orthogroups_2024-Update
Pp1s249_85V6 No alias 60s ribosomal protein l32 0.1 Orthogroups_2024-Update
Pp1s505_19V6 No alias 60s ribosomal protein l32 0.33 Orthogroups_2024-Update
Pp1s84_96V6 No alias 60s ribosomal protein l32 0.16 Orthogroups_2024-Update
Pp1s98_19V6 No alias 60s ribosomal protein l32 0.21 Orthogroups_2024-Update
Seita.2G262800.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Seita.2G262900.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.6G217300.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Seita.6G218600.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G255100.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.002G255300.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.24 Orthogroups_2024-Update
Sobic.007G197800.1 No alias component *(eL32) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Solyc02g070310 No alias 60S ribosomal protein L32 (AHRD V3.3 *** D7MRE7_ARALL) 0.11 Orthogroups_2024-Update
Solyc08g006900 No alias 60S ribosomal protein L32, putative (AHRD V3.3 *** B9T5H6_RICCO) 0.29 Orthogroups_2024-Update
Sopen02g019400 No alias Ribosomal protein L32 0.16 Orthogroups_2024-Update
Sopen08g002860 No alias Ribosomal protein L32 0.29 Orthogroups_2024-Update
evm.model.tig00020554.140 No alias (at4g18100 : 184.0) Ribosomal protein L32e; FUNCTIONS... 0.31 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 15 122
No external refs found!