- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at5g27930 : 128.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G05640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)
Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_3468.6 | |
| Cluster | HCCA clusters: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_12142 | No alias | putative protein phosphatase 2c 73 | 0.01 | Orthogroups_2024-Update | |
| A4A49_26637 | No alias | putative protein phosphatase 2c 72 | 0.03 | Orthogroups_2024-Update | |
| At1g03590 | No alias | Probable protein phosphatase 2C 1... | 0.02 | Orthogroups_2024-Update | |
| Brara.A03707.1 | No alias | clade E phosphatase | 0.01 | Orthogroups_2024-Update | |
| Brara.A03868.1 | No alias | clade E phosphatase | 0.01 | Orthogroups_2024-Update | |
| Brara.E03562.1 | No alias | clade E phosphatase | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G150100 | No alias | Protein phosphatase 2C family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G021900 | No alias | Protein phosphatase 2C family protein | 0.01 | Orthogroups_2024-Update | |
| Potri.019G054200 | No alias | Protein phosphatase 2C family protein | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Predicted GO |
| BP | GO:0006144 | purine nucleobase metabolic process | IEP | Predicted GO |
| BP | GO:0009112 | nucleobase metabolic process | IEP | Predicted GO |
| BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001932 | PPM-type_phosphatase_dom | 225 | 477 |
| No external refs found! |