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Description : (p35685|rl7a_orysa : 308.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (at2g47610 : 302.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 604.0) & (original description: no original description)
Gene families : OG_42_0001648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001648_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_3485.8 | |
| Cluster | HCCA clusters: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 270545 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.18 | Orthogroups_2024-Update | |
| A4A49_61918 | No alias | 60s ribosomal protein l7a-2 | 0.1 | Orthogroups_2024-Update | |
| At2g47610 | No alias | 60S ribosomal protein L7a-1... | 0.09 | Orthogroups_2024-Update | |
| At3g62870 | No alias | 60S ribosomal protein L7a-2... | 0.03 | Orthogroups_2024-Update | |
| Bradi4g34750 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.35 | Orthogroups_2024-Update | |
| Bradi5g24680 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.43 | Orthogroups_2024-Update | |
| Brara.A01492.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
| Brara.C02368.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.18 | Orthogroups_2024-Update | |
| Brara.D00049.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.4 | Orthogroups_2024-Update | |
| Brara.E00034.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.27 | Orthogroups_2024-Update | |
| Brara.G01985.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.45 | Orthogroups_2024-Update | |
| Brara.I04344.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.39 | Orthogroups_2024-Update | |
| Brara.K01473.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Cre12.g529651 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.29 | Orthogroups_2024-Update | |
| GRMZM2G178968 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | Orthogroups_2024-Update | |
| GRMZM5G870752 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.23 | Orthogroups_2024-Update | |
| Glyma.02G002800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.26 | Orthogroups_2024-Update | |
| Glyma.10G006200 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.31 | Orthogroups_2024-Update | |
| Glyma.11G103700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.26 | Orthogroups_2024-Update | |
| Glyma.12G028500 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.12 | Orthogroups_2024-Update | |
| HORVU5Hr1G076700.2 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
| HORVU7Hr1G054670.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Kfl00122_0060 | kfl00122_0060_v1.1 | (p35685|rl7a_orysa : 414.0) 60S ribosomal protein L7a -... | 0.17 | Orthogroups_2024-Update | |
| MA_109678g0010 | No alias | (p35685|rl7a_orysa : 335.0) 60S ribosomal protein L7a -... | 0.19 | Orthogroups_2024-Update | |
| Mp2g23250.1 | No alias | component RPL7a of LSU proteome component | 0.18 | Orthogroups_2024-Update | |
| Mp8g17650.1 | No alias | component RPL7a of LSU proteome component | 0.15 | Orthogroups_2024-Update | |
| PSME_00011086-RA | No alias | (p35685|rl7a_orysa : 336.0) 60S ribosomal protein L7a -... | 0.11 | Orthogroups_2024-Update | |
| PSME_00012846-RA | No alias | (p35685|rl7a_orysa : 273.0) 60S ribosomal protein L7a -... | 0.03 | Orthogroups_2024-Update | |
| Potri.004G113800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s149_30V6 | No alias | 60s ribosomal protein l7a | 0.11 | Orthogroups_2024-Update | |
| Pp1s149_35V6 | No alias | 60s ribosomal protein l7a | 0.28 | Orthogroups_2024-Update | |
| Pp1s211_31V6 | No alias | 60s ribosomal protein l7a | 0.41 | Orthogroups_2024-Update | |
| Pp1s37_339V6 | No alias | 60s ribosomal protein l7a | 0.04 | Orthogroups_2024-Update | |
| Pp1s90_23V6 | No alias | 60s ribosomal protein l7a | 0.07 | Orthogroups_2024-Update | |
| Seita.2G267400.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.35 | Orthogroups_2024-Update | |
| Seita.4G177300.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Seita.6G224900.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.38 | Orthogroups_2024-Update | |
| Sobic.002G258800.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.45 | Orthogroups_2024-Update | |
| Sobic.002G259000.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Solyc01g097760 | No alias | 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... | 0.4 | Orthogroups_2024-Update | |
| Solyc06g050120 | No alias | 60S ribosomal protein L7A-like (AHRD V3.3 *** Q2VCI3_SOLTU) | 0.12 | Orthogroups_2024-Update | |
| Solyc06g064470 | No alias | 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... | 0.41 | Orthogroups_2024-Update | |
| Sopen01g041360 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.32 | Orthogroups_2024-Update | |
| Sopen06g015510 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.25 | Orthogroups_2024-Update | |
| Sopen06g022930 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.04 | Orthogroups_2024-Update | |
| Sopen06g022940 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.24 | Orthogroups_2024-Update | |
| evm.model.tig00000128.22 | No alias | (p35685|rl7a_orysa : 240.0) 60S ribosomal protein L7a -... | 0.17 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| CC | GO:0019867 | outer membrane | IEP | Predicted GO |
| CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| CC | GO:0098805 | whole membrane | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 132 | 216 |
| No external refs found! |