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  5. evm.model.contig_3493.3

evm.model.contig_3493.3


Description : no hits & (original description: no original description)


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3493.3
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Sopen01g008200 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen01g025930 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen02g004560 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen02g008020 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen04g007630 No alias Chromo (CHRromatin Organisation MOdifier) domain 0.02 Orthogroups_2024-Update
Sopen05g005110 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen05g016700 No alias Integrase core domain 0.01 Orthogroups_2024-Update
Sopen05g023200 No alias Retroviral aspartyl protease 0.02 Orthogroups_2024-Update
Sopen06g009540 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen08g020120 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g008020 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen11g013220 No alias Retrotransposon gag protein 0.01 Orthogroups_2024-Update
Sopen11g021290 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen11g022720 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen11g025280 No alias Integrase core domain 0.02 Orthogroups_2024-Update
Sopen12g011940 No alias Integrase core domain 0.01 Orthogroups_2024-Update
Sopen12g021520 No alias Integrase core domain 0.03 Orthogroups_2024-Update
evm.model.contig_2215.2 No alias (original description: no original description) 0.11 Orthogroups_2024-Update
evm.model.contig_2498.1 No alias (p31843|rrpo_oenbe : 132.0) RNA-directed DNA polymerase... 0.11 Orthogroups_2024-Update
evm.model.contig_3474.1 No alias no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
evm.model.contig_3758.2 No alias no hits & (original description: no original description) 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 15 69
No external refs found!