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  5. evm.model.contig_3517.1

evm.model.contig_3517.1


Description : no hits & (original description: no original description)


Gene families : OG_42_0002895 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3517.1
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Sopen01g019060 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen03g026840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen04g007580 No alias B3 DNA binding domain 0.02 Orthogroups_2024-Update
Sopen05g021470 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen06g014830 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen09g007850 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
evm.model.contig_2450.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_3644.1 No alias no hits & (original description: no original description) 0.25 Orthogroups_2024-Update
evm.model.contig_3776.2 No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
evm.model.contig_694.1 No alias (p10978|polx_tobac : 109.0) Retrovirus-related Pol... 0.07 Orthogroups_2024-Update
evm.model.contig_867.1 No alias (original description: no original description) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP Predicted GO
InterPro domains Description Start Stop
IPR013103 RVT_2 76 290
No external refs found!