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  5. evm.model.contig_3540.2

evm.model.contig_3540.2


Description : (at4g27090 : 117.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 114.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (reliability: 234.0) & (original description: no original description)


Gene families : OG_42_0002310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3540.2
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
403602 No alias Ribosomal protein L14 0.09 Orthogroups_2024-Update
A4A49_61506 No alias 60s ribosomal protein l14-1 0.02 Orthogroups_2024-Update
At2g20450 No alias 60S ribosomal protein L14-1... 0.11 Orthogroups_2024-Update
At4g27090 No alias AT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0] 0.04 Orthogroups_2024-Update
Bradi1g06366 No alias Ribosomal protein L14 0.12 Orthogroups_2024-Update
Bradi5g15570 No alias Ribosomal protein L14 0.25 Orthogroups_2024-Update
Brara.A01683.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.25 Orthogroups_2024-Update
Brara.H01525.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Brara.K00108.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Cre17.g701200 No alias Ribosomal protein L14 0.06 Orthogroups_2024-Update
GRMZM2G140116 No alias Ribosomal protein L14 0.12 Orthogroups_2024-Update
GRMZM2G168330 No alias Ribosomal protein L14 0.12 Orthogroups_2024-Update
Glyma.02G004100 No alias Ribosomal protein L14 0.13 Orthogroups_2024-Update
Glyma.10G004300 No alias Ribosomal protein L14 0.13 Orthogroups_2024-Update
Glyma.10G182500 No alias Ribosomal protein L14 0.17 Orthogroups_2024-Update
HORVU6Hr1G058560.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Kfl00487_0060 kfl00487_0060_v1.1 (p55844|rl14_pea : 178.0) Probable 60 ribosomal protein... 0.09 Orthogroups_2024-Update
LOC_Os02g40880 No alias ribosomal protein L14, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434733g0010 No alias (at4g27090 : 182.0) Ribosomal protein L14; FUNCTIONS IN:... 0.11 Orthogroups_2024-Update
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.16 Orthogroups_2024-Update
PSME_00000258-RA No alias (at4g27090 : 212.0) Ribosomal protein L14; FUNCTIONS IN:... 0.18 Orthogroups_2024-Update
PSME_00020701-RA No alias (at2g20450 : 205.0) Ribosomal protein L14; FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
Potri.002G035700 No alias Ribosomal protein L14 0.05 Orthogroups_2024-Update
Potri.005G227300 No alias Ribosomal protein L14 0.13 Orthogroups_2024-Update
Pp1s101_10V6 No alias 60s ribosomal protein l14 0.07 Orthogroups_2024-Update
Pp1s334_38V6 No alias 60s ribosomal protein l14 0.26 Orthogroups_2024-Update
Pp1s83_247V6 No alias 60s ribosomal protein l14 0.3 Orthogroups_2024-Update
Seita.1G238800.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Seita.7G166100.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.002G286900.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.32 Orthogroups_2024-Update
Sobic.006G147000.2 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.3 Orthogroups_2024-Update
Solyc06g008260 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO) 0.12 Orthogroups_2024-Update
Solyc06g083820 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO) 0.11 Orthogroups_2024-Update
Solyc09g066430 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SV21_RICCO) 0.27 Orthogroups_2024-Update
Sopen06g003120 No alias Ribosomal protein L14 0.27 Orthogroups_2024-Update
Sopen06g035230 No alias Ribosomal protein L14 0.04 Orthogroups_2024-Update
Sopen09g028150 No alias Ribosomal protein L14 0.14 Orthogroups_2024-Update
evm.model.tig00000194.50 No alias (at4g27090 : 121.0) Ribosomal protein L14; FUNCTIONS IN:... 0.19 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 47 119
No external refs found!