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  5. evm.model.contig_3542.8

evm.model.contig_3542.8


Description : (at1g17880 : 98.2) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)


Gene families : OG_42_0001746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3542.8
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Bradi1g01600 No alias basic transcription factor 3 0.2 Orthogroups_2024-Update
Bradi3g29087 No alias basic transcription factor 3 0.05 Orthogroups_2024-Update
Brara.B02087.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Brara.G02326.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.11 Orthogroups_2024-Update
Brara.G03282.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.12 Orthogroups_2024-Update
Brara.H02448.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.17 Orthogroups_2024-Update
Brara.I04808.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.11 Orthogroups_2024-Update
GRMZM2G001887 No alias basic transcription factor 3 0.03 Orthogroups_2024-Update
GRMZM2G023242 No alias basic transcription factor 3 0.02 Orthogroups_2024-Update
GRMZM2G131577 No alias basic transcription factor 3 0.04 Orthogroups_2024-Update
Glyma.11G113901 No alias basic transcription factor 3 0.1 Orthogroups_2024-Update
Glyma.11G114001 No alias basic transcription factor 3 0.03 Orthogroups_2024-Update
Glyma.12G039900 No alias basic transcription factor 3 0.15 Orthogroups_2024-Update
HORVU1Hr1G042270.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.09 Orthogroups_2024-Update
HORVU5Hr1G122170.4 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Kfl01239_0010 kfl01239_0010_v1.... (at1g73230 : 197.0) Nascent polypeptide-associated... 0.01 Orthogroups_2024-Update
LOC_Os03g01910 No alias transcription factor BTF3, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os03g63400 No alias transcription factor BTF3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g34180 No alias transcription factor BTF3, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433493g0010 No alias (at1g17880 : 137.0) basic transcription factor 3 (BTF3);... 0.03 Orthogroups_2024-Update
MA_10436879g0010 No alias (at1g17880 : 175.0) basic transcription factor 3 (BTF3);... 0.05 Orthogroups_2024-Update
MA_798143g0020 No alias (at1g73230 : 172.0) Nascent polypeptide-associated... 0.07 Orthogroups_2024-Update
PSME_00002570-RA No alias (at1g73230 : 160.0) Nascent polypeptide-associated... 0.04 Orthogroups_2024-Update
PSME_00014555-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
PSME_00031690-RA No alias (at1g73230 : 171.0) Nascent polypeptide-associated... 0.03 Orthogroups_2024-Update
Potri.012G037900 No alias basic transcription factor 3 0.07 Orthogroups_2024-Update
Potri.015G029800 No alias basic transcription factor 3 0.06 Orthogroups_2024-Update
Pp1s213_68V6 No alias transcription factor btf3 0.27 Orthogroups_2024-Update
Pp1s28_196V6 No alias No description available 0.08 Orthogroups_2024-Update
Pp1s479_10V6 No alias T18K17.10; nascent polypeptide-associated complex (NAC)... 0.12 Orthogroups_2024-Update
Seita.9G009500.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Seita.9G572700.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.02 Orthogroups_2024-Update
Sobic.001G011200.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.2 Orthogroups_2024-Update
Sobic.001G537200.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.01 Orthogroups_2024-Update
Sopen07g004640 No alias NAC domain 0.04 Orthogroups_2024-Update
Sopen09g005060 No alias NAC domain 0.05 Orthogroups_2024-Update
evm.model.tig00021181.13 No alias (at1g73230 : 162.0) Nascent polypeptide-associated... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
CC GO:0000228 nuclear chromosome IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 46 102
No external refs found!