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evm.model.contig_3677.4


Description : (at1g63160 : 383.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (reliability: 766.0) & (original description: no original description)


Gene families : OG_42_0006612 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3677.4
Cluster HCCA clusters: Cluster_28


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0030076 light-harvesting complex IEP Predicted GO
CC GO:0030089 phycobilisome IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 232 318
IPR003959 ATPase_AAA_core 46 161
No external refs found!