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  5. evm.model.contig_435.15

evm.model.contig_435.15


Description : no hits & (original description: no original description)


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_435.15
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Bradi1g23470 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Brara.C03495.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.I02048.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G022213 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
GRMZM2G177693 No alias indeterminate(ID)-domain 7 0.01 Orthogroups_2024-Update
GRMZM5G884137 No alias indeterminate(ID)-domain 5 0.02 Orthogroups_2024-Update
Glyma.10G206600 No alias indeterminate(ID)-domain 4 0.01 Orthogroups_2024-Update
Glyma.12G070300 No alias C2H2-like zinc finger protein 0.01 Orthogroups_2024-Update
Glyma.19G159600 No alias indeterminate(ID)-domain 12 0.02 Orthogroups_2024-Update
LOC_Os08g36390 No alias ZOS8-07 - C2H2 zinc finger protein, expressed 0.01 Orthogroups_2024-Update
Mp1g15660.1 No alias C2H2 zinc finger transcription factor 0.02 Orthogroups_2024-Update
Potri.008G142500 No alias indeterminate(ID)-domain 5 0.01 Orthogroups_2024-Update
Potri.013G019200 No alias indeterminate(ID)-domain 2 0.01 Orthogroups_2024-Update
Sobic.001G242900.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update
Sopen04g033710 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
evm.model.contig_2090.3 No alias (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 119 142
No external refs found!